Reconstructing the phylogeny of Genus Apodemus (Rodentia: Muridae), providing the new mitogenome data

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ÇETINTÜRK Derya MAGLAKELIDZE Sophio SHEKLASHVILI Giorgi BUKHNIKASHVILI Alexander YIGIT Nuri

Rok publikování 2025
Druh Článek v odborném periodiku
Časopis / Zdroj HYSTRIX - ITALIAN JOURNAL OF MAMMALOGY
Citace
www http://www.italian-journal-of-mammalogy.it/Reconstructing-The-Phylogeny-of-Genus-Apodemus-Rodentia-Muridae-Providing-The-New,214117,0,2.html
Doi https://doi.org/10.4404/hystrix-00811-2025
Klíčová slova Apodemus; wood mouse; mitogenome; Sylvaemus
Popis The phylogenetic relationships between the subgenera and/or species of genus Apodemus are controversial and problematic. In this context, complete mitogenome analyses, along with Cytochrome b and Cytochrome oxidase I data, were performed to elucidate the phylogeny of this genus. The complete mitochondrial genome characteristics of four species (Apodemus mystacinus, Apodemus uralensis, Apodemus ponticus, and Apodemus witherbyi) were reported for the first time, and mean genetic distance (d) and Bayesian Inference (BI) trees were provided. Accordingly, Sylvaemus, Karstomys, Apodemus, and Alsoyms subgenera were separated by high d values and hypothesised to be different genera. In terms of Sylvaemus species, mitogenome analyses gave more statistically reliable results, with Syl. flavicollis/ Syl. ponticus being closer to Syl. uralensis, while Syl. witherbyi was closer to these species than A. sylvaticus. In addition, the results of the analyses support the idea that Syl. ponticus is a distinct species from Syl. flavicollis.
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