OverProt: secondary structure consensus for protein families

Varování

Publikace nespadá pod Ústav výpočetní techniky, ale pod Přírodovědeckou fakultu. Oficiální stránka publikace je na webu muni.cz.

Autoři	MIDLIK Adam HUTAŘOVÁ VAŘEKOVÁ Ivana HUTAŘ Jan CHARESHNEU Aliaksei BERKA Karel SVOBODOVÁ Radka
Rok publikování	2022
Druh	Článek v odborném periodiku
Časopis / Zdroj	Bioinformatics
Fakulta / Pracoviště MU	Přírodovědecká fakulta
Citace
www	https://academic.oup.com/bioinformatics/article/38/14/3648/6604272
Doi	https://doi.org/10.1093/bioinformatics/btac384
Klíčová slova	protein family; OverProt
Popis	Every protein family has a set of characteristic secondary structures. However, due to individual variations, a single structure is not enough to represent the whole family. OverProt can create a secondary structure consensus, showing the general fold of the family as well as its variation. Our server provides precomputed results for all CATH superfamilies and user-defined computations, visualized by an interactive viewer, which shows the secondary structure element type, length, frequency of occurrence, spatial variability and beta-connectivity.
Související projekty:	e-Infrastruktura CZ