Publications

Articles

• Lessons learned from European health data projects with cancer use cases: implementation of health standards and internet of things semantic interoperability

  GYRARD Amelie ABEDIAN Somayeh GRIBBON Philip MANIAS George RICK van Nuland ZATLOUKAL Kurt NICOLAE Irina Emilia DANCIU Gabriel NECHIFOR Septimiu MARTI-BONMATI Luis MALLOL Pedro DALMIANI Stefano AUTEXIER Serge JENDROSSEK Mario AVRAMIDIS Ioannis EVA Garcia Alvarez HOLUB Petr BLANQUER Ignacio BODEN Anna HUSSEIN Rada

  Article in Periodical

  Journal of Medical Internet Research, year: 2025, volume: 27, DOI

• miRBench: novel benchmark datasets for microRNA binding site prediction that mitigate against prevalent microRNA frequency class bias

  SAMMUT Stephanie GREŠOVÁ Katarína TZIMOTOUDIS Dimosthenis MARŠÁLKOVÁ Eva ČECHÁK David ALEXIOU Panagiotis

  Article in Periodical

  Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference, year: 2025, volume: 41, edition: 1, DOI

• MOLEonline: a web-based tool for analysing channels, tunnels and pores (2025 update)

  RAČEK Tomáš VEĽKÝ Dušan BUČEKOVÁ Gabriela SCHINDLER Ondřej HUTAŘOVÁ VAŘEKOVÁ Ivana ŠPAČKOVÁ Anna BAZGIER Václav BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  BIOINFORMATICS, year: 2025, DOI

• On Collaboration and Automation in the Context of Threat Detection and Response with Privacy-Preserving Features

  NITZ Lasse GURABI MEHDI Akbari ČERMÁK Milan ŽÁDNÍK Martin KARPUK David DRICHEL Arthur SCHÄFER Sebastian HOLMES Benedikt

  Article in Periodical

  Digital Threats: Research and Practice, year: 2025, volume: 6, edition: 1, DOI

• PDBCharges: Quantum-Mechanical Partial Atomic Charges for PDB Structures

  SCHINDLER Ondřej SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš BUČEKOVÁ Gabriela TICHÝ Dominik BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  Nucleic Acids Research, year: 2025, volume: 53, edition: W1, DOI

• Severity-Based Triage of Cybersecurity Incidents Using Kill Chain Attack Graphs

  SADLEK Lukáš YAMIN Muhammad Mudassar ČELEDA Pavel KATT Basel

  Article in Periodical

  Journal of Information Security and Applications, year: 2025, volume: 89, edition: March 2025, DOI

• Thermodynamic and kinetic study of palladium(II) complexation with 1-methyl-2-mercaptoimidazole (methimazole) and their importance for structural design of metallodrugs

  ŠIRŮČKOVÁ Viktorie LUBAL Přemysl HAMÁČEK Josef KAPIČKA Libor ELDING Lars-Ivar

  Article in Periodical

  JOURNAL OF INORGANIC BIOCHEMISTRY, year: 2025, volume: 262, edition: January, DOI

• Toward a Tailored Acoustic-Based Approach in Music Neuromodulation in Epilepsy

  STRÝČEK Ondřej MEKYSKA Jiří MIKLANEK Stepan FUSEK Michal ŠTILLOVÁ Klára MAZÁNEK Martin REKTOR Ivan

  Article in Periodical

  European Journal of Neurology, year: 2025, volume: 32, edition: 7, DOI

• Tumor Suppressor miR-34a: Potential Biomarker of TACE Response in HCC

  ZAVADIL Jan JURÁČEK Jaroslav ČECHOVÁ Barbora ROHAN Tomáš HUSTÝ Jakub SLABÝ Ondřej LITSCHMANNOVÁ Martina UHER Michal GOLDBERG S. Nahum ANDRAŠINA Tomáš

  Article in Periodical

  CARDIOVASCULAR AND INTERVENTIONAL RADIOLOGY, year: 2025, volume: 48, edition: 1, DOI

• Urban delineation through the lens of commute networks: Leveraging graph embeddings to distinguish socioeconomic groups in cities

  KHULBE Devashish SOBOLEVSKIJ Stanislav

  Article in Periodical

  PLOS Complex Systems, year: 2025, volume: 2, edition: 8, DOI