Bio-Volumentations
| Authors | |
|---|---|
| Year of publication | 2025 |
| Type | Software |
| MU Faculty or unit | |
| web | |
| Description | Bio-Volumentations is an image augmentation and preprocessing package for 3D (volumetric), 4D (time-lapse volumetric or multi-channel volumetric), and 5D (time-lapse multi-channel volumetric) biomedical images and their annotations. It is a handy tool for image manipulation in machine learning applications. The library can transform 3D to 5D images with image-based and point-based annotations, gives you fine-grained control over the transformation pipelines, and can be used with any major Python deep learning library (including PyTorch, PyTorch Lightning, TensorFlow, and Keras) in a wide range of applications including classification, object detection, semantic & instance segmentation, and object tracking. |
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