BCSgen: Biochemical Space language software tool

Investor logo


This publication doesn't include Institute of Computer Science. It includes Faculty of Informatics. Official publication website can be found on muni.cz.


Year of publication 2017
MU Faculty or unit

Faculty of Informatics

Description BCSgen is a software providing basic functionality to write, maintain, and analyse models written in Biochemical Space Language (BCSL). The key features of the tool are: interactive editor which allows users to create and load models providing automatic syntax highlighting and errors reporting; transition system analysis allows to generate transition system for a given model and consequently analyse it (e.g. perform reachability analysis); simulation of a model with defined kinetic rates with either deterministic or stochastic approach; visualisation of simulated data in an interactive plot chart and visualisation of transition system in a web-based visualisation for exploration of whole space.
Related projects:

You are running an old browser version. We recommend updating your browser to its latest version.

More info