Texture Analysis of 3D Fluorescence Microscopy Images Using RSurf 3D Features

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Authors

STOKLASA Roman MAJTNER Tomáš

Year of publication 2016
Type Article in Proceedings
Conference International Symposium on Biomedical Imaging (ISBI'16)
MU Faculty or unit

Faculty of Informatics

Citation
Doi http://dx.doi.org/10.1109/ISBI.2016.7493484
Field Use of computers, robotics and its application
Keywords RSurf features;HeLa cell images;object recognition;classification;fluorescence microscopy
Description Classification tasks of biomedical images are still interesting topic of research with many possibilities of improvement. A very important part in this task is feature extraction process, where different image descriptors are used. Recently, a new approach of RSurf features was introduced with application in recognition of the 2D HEp-2 cell images. In this work, we present the extension of these features for the 3D volumetric images and demonstrate its superiority in recognition of sub-cellular protein distribution. The performance is tested on public HeLa dataset containing 9 different classes. The presented k-NN classifier based purely on the RSurf 3D features achieves more than 99% accuracy in recognition of the 3D HeLa images.
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