doc. RNDr. Petr Holub, Ph.D.

2025

• Lessons learned from European health data projects with cancer use cases: implementation of health standards and internet of things semantic interoperability

  GYRARD Amelie ABEDIAN Somayeh GRIBBON Philip MANIAS George RICK van Nuland ZATLOUKAL Kurt NICOLAE Irina Emilia DANCIU Gabriel NECHIFOR Septimiu MARTI-BONMATI Luis MALLOL Pedro DALMIANI Stefano AUTEXIER Serge JENDROSSEK Mario AVRAMIDIS Ioannis EVA Garcia Alvarez HOLUB Petr BLANQUER Ignacio BODEN Anna HUSSEIN Rada

  Article in Periodical

  Journal of Medical Internet Research, year: 2025, volume: 27, DOI

• Úvod do strojového učení pro patology

  BRÁZDIL Tomáš KUKUČKA Adam MUSIL Vít NENUTIL Rudolf HOLUB Petr

  Article in Periodical

  Ceskoslovenska Patologie, year: 2025, volume: 61, edition: 1

2024

• Getting your DUCs in a row - standardising the representation of Digital Use Conditions

  JEANSON Francis GIBSON Spencer J ALPER Pinar BERNIER Alexander WOOLLEY J Patrick MIETCHEN Daniel STRUG Andrzej BECKER Regina KAMERLING Pim GONZALEZ Maria del Carmen Sanchez MAH Nancy NOVAKOWSKI Ann WILKINSON Mark D BENHAMED Oussama Mohammed LANDI Annalisa KROG Georg Philip MÜLLER Heimo RIAZ Umar VEAL Colin HOLUB Petr VAN ENCKEVORT Esther BROOKES Anthony J

  Article in Periodical

  SCIENTIFIC DATA, year: 2024, volume: 11, edition: 1, DOI

• Interpreting convolutional neural network classifiers applied to laser-induced breakdown optical emission spectra

  KÉPEŠ Erik VRÁBEL Jakub BRÁZDIL Tomáš HOLUB Petr POŘÍZKA Pavel KAISER Jozef

  Article in Periodical

  Talanta, year: 2024, volume: 266, edition: 124946, DOI

• Leveraging BBMRI-ERIC for XAI Research in Digital Pathology

  HOLUB Petr

  Requested lectures

  Year: 2024, type: Requested lectures

• Linking the ECRIN Metadata Repository with the BBMRI-ERIC Directory to connect clinical studies with related biobanks and collections

  OHMANN Christian CANHAM Steve MAJCEN Kurt MELONI Vittorio PIREDDU Luca SULIS Alessandro DELUSSU Giovanni FREXIA Francesca HOLUB Petr

  Article in Periodical

  Open Research Europe, year: 2024, DOI

• Proposal for a framework of contextual metadata in selected research infrastructures of the life sciences and the social sciences & humanities

  OHMANN Christian PANAGIOTOPOULOU Maria CANHAM Steve HOLUB Petr MAJCEN Kurt SAUNDERS Gary FRATELLI Maddalena TANG Jing GRIBBON Philip KARKI Reagon KLEEMOLA Mari MOILANEN Katja BROEDER Daan DAELEMANS Walter FIVEZ Pieter

  Article in Periodical

  International Journal of Metadata, Semantics and Ontologies, year: 2024, volume: 16, edition: 4

• Sharing sensitive data in life sciences: an overview of centralized and federated approaches

  RUJANO Maria A BOITEN Jan-Willem OHMANN Christian CANHAM Steve CONTRINO Sergio DAVID Romain EWBANK Jonathan FILIPPONE Claudia CONNELLAN Claire CUSTERS Ilse RICK van Nuland MAYRHOFER Michaela Th HOLUB Petr ÁLVAREZ Eva García BACRY Emmanuel HUGHES Nigel FREEBERG Mallory A SCHAFFHAUSER Birgit WAGENER Harald SÁNCHEZ-PLA Alex BERTOLINI Guido PANAGIOTOPOULOU Maria

  Article in Periodical

  Briefings in Bioinformatics, year: 2024, DOI

• Toward a common standard for data and specimen provenance in life sciences

  WITTNER Rudolf HOLUB Petr MASCIA Cecilia FREXIA Francesca MÜLLER Heimo PLASS Markus ALLOCCA Clare BETSOU Fay BURDETT Tony CANCIO Ibon CHAPMAN Adriane CHAPMAN Martin COURTOT Mélanie CURCIN Vasa EDER Johann ELLIOT Mark EXTER Katrina GOBLE Carole GOLEBIEWSKI Martin KISLER Bron KREMER Andreas LEO Simone LIN-GIBSON Sheng MARSANO Anna MATTAVELLI Marco MOORE Josh NAKAE Hiroki PERSEIL Isabelle SALMAN Ayat SLUKA James SOILAND-REYES Stian STRAMBIO-DE-CASTILLIA Caterina SUSSMAN Michael SWEDLOW Jason R ZATLOUKAL Kurt GEIGER Jörg

  Article in Periodical

  LEARNING HEALTH SYSTEMS, year: 2024, volume: 8, edition: 1, DOI

• Update of the Minimum Information About BIobank Data Sharing (MIABIS) Core Terminology to the 3rd Version

  EKLUND Niina ENGELS Cäcilia NEUMANN Michael STRUG Andrzej ESTHER van Enckevort BABER Ronny BLOEMERS Margreet DEBUCQUOY Annelies AAD van der Lugt MÜLLER Heimo PARKKONEN Lauri QUINLAN Philip R URWIN Esmond HOLUB Petr SILANDER Kaisa ANTON Gabriele

  Article in Periodical

  BIOPRESERVATION AND BIOBANKING, year: 2024, volume: 22, edition: 4, DOI